AI and scientific discovery bibliography

Growing an organism is not like booting up a computer…A society that permits biology to become an engineering discipline, that allows that science to slip into the role of changing the living world without trying to understand it, is a danger to itself.

Carl Woese, quoted by Segall and Damer, 2024, The cosmological context of the origin of life: process Philosophy and the hot spring hypothesis, in: Astrophilosophy, Exotheology, and Cosmic Religion: Extraterrestrial Life in a Process Universe, p. 91

Latest

Jaeger, 2024, Artificial intelligence is algorithmic mimicry: why artificial “agents” are not (and won’t be) proper agents (arXiv)

Langley, 2024, Integrated Systems for Computational Scientific Discovery (Institute for the Study of Learning and Expertise)

Messeri and Crockett, 2024, Artificial intelligence and illusions of understanding in scientific research, in: Nature

Jayatunga, et al., 2024, How successful are AI-discovered drugs in clinical trials? A first analysis and emerging lessons, in: Drug Discovery Today

UN System Chief Executives Board for Coordination, 2024, Summary of deliberations: United Nations system white paper on artificial intelligence governance: an analysis of current institutional models and related functions and existing international normative frameworks within the United Nations system that are applicable to artificial intelligence governance. “Under the ILO governance model, both trade unions and organizations of employers are involved in standard -setting and meetings of executive committees for shared decision-making and governance on an equal footing with Governments” (p. 39).

Ebers, 2024, Truly Risk-Based Regulation of Artificial Intelligence: How to Implement the EU’s AI Act (Stanford-Vienna Transatlantic Technology Law Forum)

Zhang, et al., 2024, Parallel molecular data storage by printing epigenetic bits on DNA, in: Nature. “An automatic liquid handling platform was used to typeset large-scale data at a speed of approximately 40 bits s−1”.

WIPO, 2024, Patent Landscape Report – Generative Artificial Intelligence (GenAI)

Villalobos, et al., 2024, Will we run out of data? Limits of LLM scaling based on human-generated data (arXiv)

Gebicke-Haerter, 2023, The computational power of the human brain, in: Frontiers in Human Neuroscience

Esposito and Baravalle, 2023, The machine-organism relation revisited, in: History and Philosophy of the Life Sciences

Park, et al., 2023, Papers and patents are becoming less disruptive over time, in: Nature

Duan Weiwen, 2023, The Challenge of Artificial Intelligence Scientists to the Epistemology of Science, in: Journal of Library and Information Science in Agriculture

Hajkowicz, et al., 2023, Artificial intelligence adoption in the physical sciences, natural sciences, life sciences, social sciences and the arts and humanities: a bibliometric analysis of research publications from 1960-2021, in: Technology in Society

Maffettone, et al., 2023, What is missing in autonomous discovery: open challenges for the community, in: Digital Discovery

OECD, 2023, Artificial Intelligence in Science: Challenges, Opportunities and the Future of Research

Rindzevičiūtė, 2023, The Will to Predict: Orchestrating the Future Through Science

Zenil, et al., 2023, The Future of Fundamental Science Led by Generative Closed-Loop Artificial Intelligence (arXiv)

Stepney, 2023, Life as a Cyber-Bio-Physical System, in: Genetic Programming Theory and Practice XIX

Hadi Esmaeilzadeh, et al., 2023, Retrospective: dark silicon and the end of multicore scaling, in: ISCA@50 25-Year Retrospective: 1996-2020

Gebicke-Haerter, 2023, The computational power of the human brain, in: Frontiers in Human Neuroscience

Kagan, et al., 2022, In vitro neurons learn and exhibit sentience when embodied in a simulated game-world, in: Neuron

Schuman,et al., 2022, Opportunities for neuromorphic computing algorithms and applications, in: Nature Computational Science

Emmerich, 2021, Die Auswirkungen künstlicher Intelligenz auf die erfinderische Tätigkeit und das Erfinderprinzip

Kastrin and Hristovski, 2021, Scientometric analysis and knowledge mapping of literature-based discovery (1986–2020), in: Scientometrics

Kitano, 2021, Nobel Turing Challenge: creating the engine for scientific discovery, in: npj Systems Biology and Applications (Nobel Turing Challenge)

Undheim, 2021, Future Tech: How to Capture Value from Disruptive Industry Trends

Dally, et al., 2021, Evolution of the Graphics Processing Unit (GPU), in: IEEE Micro [Dally is a significant figure in NVIDIA]

Dixon, et al., 2021, Sensing the future of bio-informational engineering, in: Nature Communications

*Fernandez, et al., 2020, Engineering digital monopolies: The financialisation
of Big Tech
(Stichting Onderzoek Multinationale Ondernemingen – Centre for Research on Multinational Corporations)

Burger, et al., 2020, A mobile robotic chemist, in: Nature

Mignan and Broccardo, 2020, Neural network applications in earthquake prediction (1994-2019): meta‐analytic and statistical insights on their limitations, in: Seismological Research Letters

Stevens, et al., 2020, AI for Science: Report on the Department of Energy (DOE) Town Halls on Artificial Intelligence (AI) for Science

Yuh-Shan Ho and Ming-Huang Wang, 2020, A bibliometric analysis of artificial
intelligence publications from 1991 to 2018, in: COLLNET Journal of Scientometrics and Information Management

UN Inter-Agency Working Group on AI (2020-2025)AI for Good

2010-2020

Nicholson, 2019, Is the cell really a machine?, in: Journal of Theoretical Biology

Pirtle and Moore, 2019, Where Does Innovation Come From?: Project Hindsight, TRACEs, and What Structured Case Studies Can Say About Innovation, in: IEEE Technology and Society Magazine

Veale and Cardoso, 2019, Computational Creativity: The Philosophy and Engineering of Autonomously Creative Systems

Stuart, 2019, The role of imagination in social scientific discovery: why machine discoverers will need imagination algorithms, in: Scientific Discovery in the Social Sciences

Charlton McIlwain, 2019, Black Software: The Internet and Racial Justice, From the Afronet to Black Lives Matter

Leung, 2019, Who will govern artificial intelligence? Learning from the history of strategic politics in emerging technologies (University of Oxford)

Sybrandt, et al., 2017, MOLIERE: Automatic Biomedical Hypothesis Generation System, in: KDD

Mody, 2017, The Long Arm of Moore’s Law: Microelectronics and American Science

Jasanoff, 2016, The Ethics of Invention: Technology and the Human Future

Peek, et al., 2015, Thirty years of artificial intelligence in medicine (AIME) conferences: A review of research themes, in: Artificial Intelligence in Medicine

Müller, et al., 2015, High-resolution CMOS MEA platform to study neurons at subcellular, cellular, and network levels, in: Lab on a Chip

Stephens, et al., 2015, Big data: astronomical or genomical?, in: PLoS Biology

LeCun, et al., 2015, Deep learning, in: Nature

Juršič, 2015, Text mining for cross-domain knowledge discovery (Jožef Stefan International Postgraduate School)

Chen, 2013, Mapping Scientific Frontiers: The Quest for Knowledge Visualization‎

Rabinow and Dan-Cohen, 2013, A Machine to Make a Future: Biotech Chronicles

Dunbar and Klahr, 2013, Developmental differences in scientific discovery processes, in: Complex Information Processing: The Impact of Herbert A. Simon

Stengers, 2013, Une autre science est possible ! Manifeste pour un ralentissement des sciences (reviewed by Dufaud, 2015, in: Artefact)

Dutfield, 2012, Did Kary Mullis really invent PCR? (video)

Deftereos, et al., 2011, Drug repurposing and adverse event prediction using high-throughput literature analysis, in: WIREs Mechanisms of Disease

Swanson, 2011, Literature-based Resurrection of Neglected Medical Discoveries, in: Journal of Biomedical Discovery and Collaboration (see also: Arrowsmith)

Vapnik, 2010, Introduction: four periods in the research of the learning problem, in: The Nature of Statistical Learning Theory, 2nd edition

2000-2010

Mitchell, 2009, Complexity: A Guided Tour‎

Koomey, et al., 2009, Assessing Trends in the Electrical Efficiency of Computation over time (Microsoft Corporation and Intel Corporation)

Engelbrecht, 2007, Computational Intelligence: an Introduction

Searls, 2007, A view from the dark side, in: PLoS Computational Biology

Dzeroski and Todorovski, 2007, Computational Discovery of Scientific Knowledge: Introduction, Techniques, and Applications in Environmental and Life Sciences

Gresock, et al., 2007, Mining Novellas from PubMed Abstracts using a Storytelling Algorithm (Virginina Tech)

Christopher Lecuyer and David C. Brock, 2006, The materiality of microelectronics, in: History and Technology

Montrym and Moreton, 2005, The GeForce 6800, in: IEEE Micro

Smalheiser, 2005, The Arrowsmith Project: 2005 Status Report, in: Discovery Science: 8th International Conference

Thomas P. Hughes, 2004, Origins of the information revolution, in: Human-Built World: How to Think about Technology and Culture, pp. 96-109

McCorduck, 2004, Machines Who Think: A Personal Inquiry into the History and Prospects of Artificial Intelligence (see also: McCorduck, 2019, This Could Be Important: My Life and Times with the Artificial Intelligentsia)

Carl R. Woese, 2004, A new biology for a new century, in: Microbiology and Molecular Biology Reviews

Menzies, 2003, 21st-century AI: proud, not smug, in: IEEE Intelligent Systems

Aviv Regev and Ehud Shapiro, 2002, Cellular abstractions: cells as computation, in: Nature

Lu Qiwen, 2000, China’s Leap into the Information Age: Innovation and Organization in the Computer Industry

1990-2000

Langley, 1999, The Computational Support of Scientific Discovery, in: Advanced Course on Artificial Intelligence ACAI 1999: Machine Learning and Its Applications (Pat Langley, Adaptive Systems Group, Daimler Chrysler Research and Technology Center, Palo Alto)

Qin and Norton (eds.), 1999, Knowledge Discovery in Bibliographic Databases (University of Illinois)

Valdés-Pérez, 1999, Principles of human-computer collaboration for knowledge discovery in science, in: Artificial Intelligence

Moravec, 1998, When will computer hardware match the human brain?, in: Journal of Evolution and Technology

Langley, 1997, Computational Scientific Discovery (Institute for the Study of Learning and Expertise)

Swanson and Smalheiser, 1997, An interactive system for finding complementary literatures: a stimulus to scientific discovery, in: Artificial Intelligence

Landauer, 1996, The physical nature of information, in: Physics Letters A

Schaffer, 1996, Babbage’s calculating engines and the factory system, in: Réseaux. Communication – Technologie – Société

Carver Mead, 1990, Neuromorphic electronic systems, in: Proceedings of the IEEE

Institute for the Study of Learning and Expertise (ISLE) [website]

Before 1990

Paul A. David, 1989, Computer and dynamo: the modern productivity paradox in a not-too distant mirror (OECD International Seminar on Science, Technology and Economic Growth)

Forester, 1987, High-Tech Society

Bradshaw, et al., 1983, Studying scientific discovery by computer simulation, in: Science

Kraus and Bar-Cohen, 1983, Thermal Analysis and Control of Electronic Equipment

Langley, 1981, Data-driven discovery of physical laws, in: Cognitive Science

Yoxen, 1981, Life as a productive force: capitalizing the science and technology of molecular biology, in: Science, Technology, and the Labour Process: Marxist Studies, vol. 1 (eds. Levidow and Young), pp. 66-122

Duncan, 1981, Microelectronics: five areas of subordination, in: Science, Technology, and the Labour Process: Marxist Studies, vol. 1 (eds. Levidow and Young), pp. 172-207

Langley, 1979, Rediscovering physics with BACON.3, in: IJCAI’79: Proceedings of the 6th international joint conference on Artificial intelligence

Simon, 1977, Theory of scientific discovery, in: Models of Discovery and Other Topics in the Methods of Science. The argument is that the key to automated scientific discovery would be in understanding how human brains discover (the ‘psychology of problem solving’) and then seeking to replicate this process with a machine.

Buchholz (ed.), 1962, Planning a Computer System: Project Stretch

Herbert Simon was a notable Cold War academic personality who won the Nobel Prize in Economic Sciences (1978). He has been dubbed the ‘founding father’ of AI (UBS Nobel Perspectives). Besides Simon’s own autobiography, a biography, Crowther-Heyck, 2005, Herbert A. Simon: The Bounds of Reason in Modern America, and Hickey, 2016, Twentieth-Century Philosophy of Science: A History, are informative.

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